/mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/Miscellaneous/BuildScripts/compile.sh running with
 APPNAME = OptimisedKernel_Euler
 SPECFILE = OptimisedKernel_Euler.exahype
 ABSAPPDIR = /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/ApplicationExamples
 APPDIRNAME = ApplicationExamples
 CLEAN = None
 PROJECTNAME = Euler
 SKIP_TOOLKIT = No
at Sun 18 Dec 12:50:36 CET 2016 on iboga43 as koeppel

Running toolkit
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================================

 www.exahype.eu 

================================

The project has received funding from the European Union's 
Horizon 2020 research and innovation programme under grant 
agreement No 671698 (ExaHyPE). It is based upon the PDE 
framework Peano (www.peano-framework.org).


read input file ApplicationExamples/OptimisedKernel_Euler.exahype ... ok





Start to interpret script ... 
Peano kernel path: /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/./Peano ... ok
Peano kernel path /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/./Peano holds peano sources ... ok
Peano kernel path /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/./Peano holds tarch sources ... ok
Peano toolboxes path: /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/./Peano ... ok
Peano toolboxes path /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/./Peano holds multiscalelinkedcell sources ... ok
Peano toolboxes path /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/./Peano holds sharedmemoryoracles sources ... ok
Peano toolboxes path /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/./Peano holds mpibalancing sources ... ok
ExaHyPE path: /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/./ExaHyPE ... ok
output directory: /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/./ApplicationExamples/OptimisedKernel_Euler ... does exist (will not be overwritten)





validated and configured pathes ... ok
create header of solver MyEulerSolver ... ok
user's implementation file of solver MyEulerSolver ... does exist already. Is not overwritten
Codegenerator command line: env python3 /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/CodeGenerator/Driver.py Euler 5 9 2 nonlinear noarch /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/./Libxsmm 
CodeGenerator: i_nVectors 10
CodeGenerator: l_nVectorGroup 10
CodeGenerator: l_nVectorRest 0
CodeGenerator: i_chunkSize 10
CodeGenerator: Traceback (most recent call last):
CodeGenerator:   File "/mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/CodeGenerator/Driver.py", line 124, in <module>
CodeGenerator:     Backend.generateComputeKernels()
CodeGenerator:   File "/mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/CodeGenerator/Backend.py", line 165, in generateComputeKernels
CodeGenerator:     weightsGenerator.generateCode()
CodeGenerator:   File "/mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/CodeGenerator/WeightsGenerator.py", line 61, in generateCode
CodeGenerator:     self.__generateWeightsCombinations()
CodeGenerator:   File "/mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/CodeGenerator/WeightsGenerator.py", line 83, in __generateWeightsCombinations
CodeGenerator:     l_weightsVector      = np.pad(self.m_wGPN, (0.0, l_padWidth), mode='constant')
CodeGenerator:   File "/usr/lib/python3/dist-packages/numpy/lib/arraypad.py", line 1315, in pad
CodeGenerator:     raise TypeError('`pad_width` must be of integral type.')
CodeGenerator: TypeError: `pad_width` must be of integral type.
create generated implementation of solver MyEulerSolver ... ok





generate application-specific solver classes ... ok
WARNING: file MyEulerSolver_Plotter1.h already exists. Is not overwritten
WARNING: file MyEulerSolver_Plotter1.cpp already exists. Is not overwritten





generate application-specific plotter classes ... ok





generate coupling routines ... ok
added creation of solver MyEulerSolver ... ok
added plotter ... ok
added plotter ... ok
configured all solver solvers ... ok





generate computational kernel calls ... ok
2d experiment ... ok
store pathes and default settings in makefile ... ok




please change into directory /mnt/beegfs/koeppel/exahype-iboga/ExaHyPE-Engine/./ApplicationExamples/OptimisedKernel_Euler and type make 
ensure that you set all environment variables before:
  export COMPILER=GNU                   Select GNU compiler
  export COMPILER=Intel                 Select Intel compiler (default)

  export MODE=Debug                     Build debug version of code
  export MODE=Asserts                   Build release version of code that is augmented with assertions
  export MODE=Profile                   Build release version of code that produces profiling information
  export MODE=Release                   Build release version of code (default)

  export SHAREDMEM=TBB                  Use Intel's Threading Building Blocks (TBB) for shared memory parallelisation
  export SHAREDMEM=OMP                  Use OpenMP for shared memory parallelisation
  export SHAREDMEM=None                 Do not use shared memory (default if not indicated otherwise by "shared memory ..." message above)

  export DISTRIBUTEDMEM=MPI             Use MPI
  export DISTRIBUTEDMEM=None            Do not use MPI (default)

  export TBB_INC=-I...                  Indicate where to find TBB headers (only required if SHAREDMEM=TBB). Please add -I (Linux) prefix to path
  export TBB_SHLIB="-L... -ltbb"        Indicate where to find TBB's shared libraries (only required if SHAREDMEM=TBB). Variable has to comprise both search path and library name


  If SHAREDMEM or DISTRIBUTEDMEM are not specified, they fall back to "None".

  If you run CSH, please replace "export ARG=VALUE" with "setenv ARG VALUE".





setup build environment ... ok