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Allow using a parent directory of the old package as the new package dir

Jonathan Külz requested to merge dev/package_dir_change into main

I couldn't choose /a/b as the new package dir for files that had package dir /a/b/c/d previously without the resulting links being broken.

This fixes it, but is it compliant with the expected CoBRA file locations @MatthiasMayer ?

Edited by Jonathan Külz

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