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Update to version v2.1

Merged Simon Rahn requested to merge transmission_model_sw_architecture_revision into master

Updates the transmission model, that is the transmission and dose response are treated as two different submodels.

  • Refactor software architecture: The previous concept of the TransmissionModel is now divided into exposure (AbstractExposureModel) and dose response (AbstractDoseResponseModel).
  • Introduce new ExposureModelHealthStatus and DoseResponseModelInfectionStatus for pedestrians
  • Remove InfectionStatus that was inspired by compartmental susceptible-exposed-infectious-recovered models
  • Adapt GUI: add agent coloring related to the health status and opacity of aerosol clouds
  • Replace deprecated data writers
  • Migrate the scenario files

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